Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913592.1_cds_XP_016463647.1_56752

CDS Infomation

[gene=LOC107786647] [db_xref=GeneID:107786647] [protein=protein TSS-like] [protein_id=XP_016463647.1] [location=complement(join(15172..16863,17264..17342,17433..17545,18041..18172,18404..18587,18862..18995,19452..19556,19685..19786,19874..19966,20035..20340,20430..20531,20614..20676,21183..21684,22114..22268,22846..23370,23464..23502,23913..24047,24120..24184,24278..24359))] [gbkey=CDS]

Sequence

ATGGTGGCGATTCATCCAATTCCTAAGCTCTCTGATTTCTACGAGTTCTTCTCTTTCTCT
AACCTCTCTCCGCCTATACTAAGTTTGAAAAGAGTTGATTGTAACGATGCTAAAACAAGG
CGAGATGGCGATTATTTCGAATTACAGATTAAGATATGCAATGGGAAGACATTACAAGTG
GTTGCAGCAGCAAAAGGTTTCTATACATTGGGGAAGCCACTTATGCGAAGCCATTGCTTG
GTTGATCTTCTGCAACAGCTCAGCCAAGCTTTTGCTAATGCATATGAATCCTTGATGAAG
GCCTTTACAGAACATAACAAGTTTGGTAATCTTCCATATGGTTTCCGCGCCAACACATGG
CTTGTCCCTCCATCAGTCGTTGATTCTGCGTCAAACTTCACTCCCCTTCCAGTGGAAGAT
GAGAGTTGGGGTGGCAACGGCGGAGGTCAGGGAGGGAACGGAGAGCATGATCATAGATCA
TGGGCTACAGATTTTGCAGTACTGGCAAAGCTTCCTTGCAAGACTGAAGAGGAGAGGGTG
GTTCGAGACCGAAAGGCTTTTTTGCTTCATAATCTTTTCCTTGACGTCTCTATTTTTAAA
GCTGTCTCAGCCATATACAAAGTCATGGATTCTACTTCTAGGGGTACCTCAAATTGTGCT
TTGGGTTCAGTACTCTCTGAGGACTGCATTGGTGATTTGTCTATTACAGTTAAGAGAGAT
TTCGGCGATGCTAGCCTGAAAGAAGCCAAAGTTATCGGCAGTAGAGATTTTAATGAATCT
GCTGAGGATGTCGCTCAAAGAAACTTAGCTAAAGGGGTAACTGCCGATGAAAGTGTTGTC
ATACATGATACATCCTCATTGGGCATGGTGTCAGTGCGACATTGTGGCTACACTGCAATT
GTGAAAGTTGTTGGTGACATTAAAGTGGATAAGAGTCTGCCTCTGGATATCGAAATCGAT
GATCAACCAGATGGGGGAGCCAATGCACTCAACATCAACAGCTTACGCCTTCTGCTCAAC
AAGCCAATGACTGCTGGTTTTTCTGGAGGTGGTCAATTGCCCCAGTCTGATTTGGACGAC
CATGCAAATTCAATGTCTTTGGTCCATAAAATCATTAAGGATGATTTGAGTAAGCTAAAG
GGAATGGATGATAAATCCAAAGGGTCCATCAGATGGGAACTTGGTTCTTGTTGGGTTCAG
CATCTACAAAAGCAAGAAACACCATCAGAGGACACAATTGGGAATGATGGTAAGGCTGAA
CCCATAGTTAAGGGACTTGGAAGACAGTTTAAAATGCTCAAAAAGAGGGAAACAAGACCA
AGTACTGTAAGTTCCATGGATGACAATGAAGCAGATGATGTGACAGCCAGCACTCTGAAC
GCAGAAAGTGGCTCGACGGAACTTAGCAATGGCAAACCAAAGTGTGAAACTGAATGGAGG
AGATTTGTCTCGCAAGAAGCTTACCTTCGTTTGAAAGAAAGTGGAATGGATCTTCATCTG
AAGTCAGTGGATGAACTTGTCGAAATGGCACACAAGTATTATGATGAAGTTGCTATCCCG
AAGCTGGTTACAGACTTTGCATCGTTGGAACTTTCTCCAGTTGATGGACGCACCCTTACT
GACTTCATGCATCTTAGGGGTTTACAAATGCGTTCTTTGGGTCGTGTGGTTGAACTTGCA
GAGAAGCTTCCTCACATACAGTCGCTTTGTATTCATGAGATGGTTACTCGAGCTTTCAAG
CATGTACTTAGAGCTGTCATTGCCTCCATTGACAATGTAGCCAACTTATCAGCTGCTATA
GCATCATCCTTAAATTTCTTGTTTGGGTCCTCTACCACACAAGACAGTGATGAAAACCAC
ATTCTCAAGATGCAATGGTTAAGGGAATTTCTTTTTGAAAGATTCAGTTGGAGATTAAAA
GATGAATTCCAACAGTTGAGGAAATTGTCGGTCCTCCGCGGACTTTGTCATAAGGTTGGA
TTAGAGTTGATTCCAAAAGATTATGATATGGAAAGCCCATATCCCTTCAGTAAAACTGAT
GTTATCAGCGTAGTGCCTTTGTGTAAACATGTTGGATGCTCTTCTGCTGATGGACGGACT
TTACTAGAATCATCTAAGGTTGCCCTTGACAAAGGGAAGTTGGAAGATGCTGTAATGTAT
GGAACAAAGGCCCTGGCAAAATTGATAGCTGTATGTGGACCCTATCACCGTGCCACTGCA
AGTGCATATAGCCTCCTGGCCGTTGTCCTTTATCACACTGGAGACTTCAATCAGGCAACA
ATCTATCAACAGAAGGCATTGGATATCAATGAGAGGGAGCTAGGACTTGACCATCCAGAT
ACAATGAAAAGTTACGGGGATCTTTCTGTATTCTACTATCGTCTCCAGCACATTGAGTTG
GCTCTAAAGTATGTCAACCGAGCCTTATTTCTTCTTCACTTTACATGTGGACTATCTCAT
CCAAACACAGCTGCTACATACATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTG
CATATTGCTCTTAGATATCTACATGAAGCCCTTAAGTGCAACCAAAGATTACTGGGAGTA
GATCATATACAGACTGCTGCCAGCTATCATGCCATAGCTATAGCTCTTTCTCTCATGGAA
GCATATTCACTGAGTGTGCAACATGAGCAAACTACATTGCAGATTCTTCAAGCAAAACTA
GGAGCAGAGGATCTCCGTACTCAGGATGCTGCTGCATGGCTTGAATACTTTGAATCAAAA
GCCCTAGAGCAGCAGGAAGCTGCAAGAACTGGAGCTCCAAGATTAGATGCAACCATTGCT
AGCAAAGGTCACCTCAGCGTGTCAGATCTATTGGATTACATTAGTCCTGGCCAGGGTTCA
AAGACCATTGAAGCACAGAGGAAGCGACGTTCAAAGGTGTTGCCAGTAGATGATCAATCT
CAAAAAGGACAGCATGATGGAAGAAGTAACAACCCCTTGGATCATGATGTTACAAAAAAT
CCTGCGACTGTAGTAGAAGTTAACAAGAAAGAAGACGACTCAGAGGGGGTTGCTACTCAA
GAACTTGAAGGCAGCAATAGCACTAAAAATGAGGAATCAGTGGAAATAAATGAAGAAACT
AGCTCTGATGAAGGGTGGCAGGAAGCGAATTCGAAAACGCGGACGGGGCATGGTAGTGGC
AAGATGTTCAACCGAAGGCAACCAGGTCTTGCCAAGATCAATACAAACTTGGAATACTTT
TTCCCCCGGGACAGCAGTTCCAGGAAAGAAGTTACTTCACAGGGACAAAAAGTGGCATCT
AAGATTGGTTTAGGTGAATTTTCACCTGTAAAGCAACTAAAAGCTGCTAGTTTCAGTTCT
TCTGAAAAGTCAACCAAACTCTCAGCTAAAATGACTGTTGCCGAAGTTTCTCGCACATCA
AATATCACTGTTCTCTCTCCTCCTGCCTCTCTTGCTACCATGGCTTCCAAATCCTTATCA
TACAAAGAAGTAGCAGTGTCGCCACCAGGTACGGTTCTAAAGCCTTTATTGGAGAAAGTA
GAAGAATTAAATGAGGATAAAACTGATTCCCAGATCTGCGTTAGTCCAACTGAAACATCA
GAAGAAGATGGAAAGCAGTCGGTGACCATAGAGGCTACACCTGCCAATGATCGAGACGGA
CAAGGAATCCATGAAGACGAAGGCCAGATAAGTGGATCTGAGTCAGAGAAATCTTCCCTG
GAGCCTGAAGGTGTTTCATGTTCAAGTAATGAGGAAATATCTTTACGATCAAATGGGAGC
AAGCTATCTGCGGCTGCTGAACCATTCAATCCAGGTGCCTACCATTTGACCAATATGCTG
ATTTCTGCTGCTGTGACCAACGTCTATGATGTTAGAGCCAACCAAGGCATGCTTACTGAA
CCAGTGGGCTTTCCATCAATTGCTGAGAGAGTTCCTTGTGGTCCCAGATCATCTTTGTAC
CACAGGACAAGCCATTCTCACATGAAAAATGGATATGTGAATTACCAAAGTCCTGTTGCT
GAAATAAGCAGTTATGATTATCCAAGAATCATGAATCCACATGCACCTGAATTTGTTCCA
AGTAAAGCACGGCCGACGAGTGCTGCAACTGAAGATTCAAGAGTAGCTATTGATGCTGAT
TCTTCGACAGGGTTGAATAACTCGGTCACAATAGTTTCAGCAGAGGAGAAGATTGATAAA
AAGGCTACAATTGACGTCAGAAATGCTAGATCAACAAAAAGCAGACTACATGCTGAGAGG
GAAGAGCTAGCTAGGCAAATACAAAATAGCTTCATTGTGAAGTCAAAACAGAACACTTCA
GATGGCCCAAGTGAATTTCCAGTTAGTACAAAGAAGTCTGAGTTCTTAGTTAGCGCTGCT
AAAGCAAGTGCAGATGATAGTGCAACTAAATTGCAATGTGGAAGTGAAGGGAAAAAAGAA
CTTTTGACAGAAGCAAATAAATATAGCGGGGCAAAGACAGTTGATGTAAATAAAAATAAG
CACGAGGATGGAGACGGTTTTTTGCCTGTGATAAAGCGTAGAAGAAACAGGCGACAATTT
GCCCATGGAATAAATGGGTTGTACAGTCAGCAGTCAATCTGTGCTTAA

Peptide Sequence

PEP ID

XP_016463647.1

PEP Infomation

PREDICTED: protein TSS-like [Nicotiana tabacum]

Sequence

MVAIHPIPKLSDFYEFFSFSNLSPPILSLKRVDCNDAKTRRDGDYFELQIKICNGKTLQV
VAAAKGFYTLGKPLMRSHCLVDLLQQLSQAFANAYESLMKAFTEHNKFGNLPYGFRANTW
LVPPSVVDSASNFTPLPVEDESWGGNGGGQGGNGEHDHRSWATDFAVLAKLPCKTEEERV
VRDRKAFLLHNLFLDVSIFKAVSAIYKVMDSTSRGTSNCALGSVLSEDCIGDLSITVKRD
FGDASLKEAKVIGSRDFNESAEDVAQRNLAKGVTADESVVIHDTSSLGMVSVRHCGYTAI
VKVVGDIKVDKSLPLDIEIDDQPDGGANALNINSLRLLLNKPMTAGFSGGGQLPQSDLDD
HANSMSLVHKIIKDDLSKLKGMDDKSKGSIRWELGSCWVQHLQKQETPSEDTIGNDGKAE
PIVKGLGRQFKMLKKRETRPSTVSSMDDNEADDVTASTLNAESGSTELSNGKPKCETEWR
RFVSQEAYLRLKESGMDLHLKSVDELVEMAHKYYDEVAIPKLVTDFASLELSPVDGRTLT
DFMHLRGLQMRSLGRVVELAEKLPHIQSLCIHEMVTRAFKHVLRAVIASIDNVANLSAAI
ASSLNFLFGSSTTQDSDENHILKMQWLREFLFERFSWRLKDEFQQLRKLSVLRGLCHKVG
LELIPKDYDMESPYPFSKTDVISVVPLCKHVGCSSADGRTLLESSKVALDKGKLEDAVMY
GTKALAKLIAVCGPYHRATASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPD
TMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNV
HIALRYLHEALKCNQRLLGVDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKL
GAEDLRTQDAAAWLEYFESKALEQQEAARTGAPRLDATIASKGHLSVSDLLDYISPGQGS
KTIEAQRKRRSKVLPVDDQSQKGQHDGRSNNPLDHDVTKNPATVVEVNKKEDDSEGVATQ
ELEGSNSTKNEESVEINEETSSDEGWQEANSKTRTGHGSGKMFNRRQPGLAKINTNLEYF
FPRDSSSRKEVTSQGQKVASKIGLGEFSPVKQLKAASFSSSEKSTKLSAKMTVAEVSRTS
NITVLSPPASLATMASKSLSYKEVAVSPPGTVLKPLLEKVEELNEDKTDSQICVSPTETS
EEDGKQSVTIEATPANDRDGQGIHEDEGQISGSESEKSSLEPEGVSCSSNEEISLRSNGS
KLSAAAEPFNPGAYHLTNMLISAAVTNVYDVRANQGMLTEPVGFPSIAERVPCGPRSSLY
HRTSHSHMKNGYVNYQSPVAEISSYDYPRIMNPHAPEFVPSKARPTSAATEDSRVAIDAD
SSTGLNNSVTIVSAEEKIDKKATIDVRNARSTKSRLHAEREELARQIQNSFIVKSKQNTS
DGPSEFPVSTKKSEFLVSAAKASADDSATKLQCGSEGKKELLTEANKYSGAKTVDVNKNK
HEDGDGFLPVIKRRRNRRQFAHGINGLYSQQSICA

Transcript Sequence

Gene sequence data has not been registered.